Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803362.1_cds_XP_016484058.1_7502
CDS Infomation

[gene=LOC107804650] [db_xref=GeneID:107804650] [protein=autophagy-related protein 18d-like] [protein_id=XP_016484058.1] [location=complement(join(4042..4135,4420..4543,4832..5087,7161..7966,8990..9233))] [gbkey=CDS]
Sequence

ATGCGAACGATGATGGTGTCAAAAACAAAAGATCCCCTCGAATCAGCACACCCAAAAATA
GAAATAACCCGTCGGACTCTTCTCTCCTCAGTCGTGCTTTCCTCTCCAATCTTTCCCTTC
AATCACAAGTCACATATCACAAATCACCCTCCCAAACATCTGGGCATCTCTCTCTTTGAT
CGTGACATCGCAGTCGCTAGCACAAAATTTGAGCTTCACCAATTGCTGCCGAACCAACAC
AAAGATTTCCATAGCTTCTGTTTGCATTTGGTGATGACTACTCTATCATCCCCAACGGGT
TCAGCTGTCTCACCATCTCGAGGGACACTTTCACCAGCAGCCTATGGGACATATGAATCC
CCCATGCCCGGGGCCTCTCATTCTGGCCATTCTGAACCAGAGATCAGTGACAATGATGAA
ACAGAGCTACACTCTGTGTCATGGAATCAGGATTACAGTTGCTTTGCTGCTGGCACTAGC
CGTGGCTTTCGTGTATATAACTGTGATCCTTTCAAAGAGACTTTCAGACGTGATCTGAAA
AGTGGTGGGTTTGGAATAGTAGAGATGTTGTTCCGATGCAACATTTTAGCACTTGTCGGT
GCCAGGACTAACGCCCAATACCCACCTAATAAAGTTATTATATGGGATGATCATCAGAGC
CGATGCATTGGTGAATTTTCATTTAGGTCTGATGTTTGTGCAGTGAAACTAAGACGGGAT
TGTATTGTTGTAGTCCTTGAACACAAGATATATGTCTACAACTTTATGGATCTAAAGCTT
CTTCATCAGATAGAGACTGTGGGCAATCCCAGGGGACTTTGCTGCCTCTCACACCATTTA
AATACATCTGTATTGGCTTGCCCAGGTGTTCGAAGAGGACAGGTCCGGGTTGAGCATTTT
GGCCTGAACATGACAAAGTTGATCAAGGCGCATGATTCTCAGATAGCATGCTTAACCTTG
ACTATGGATGGGCTGCTTCTTGCAACAGCAAGCACTCGGGGAACTTTGATAAGACTCTTC
AACACCATGGATGGAACTCAGTTGCAAGAGGTGCGTAGAGGGGTTGACAAAGCAGATATC
TATAGTATTGCACTATCACCAAATGTGCAGTGGTTGGCCGTCTCTAGCGACAAAGGTACC
ATCCATGTGTACAGCCTAAGAGTACGTGTTGTTGGCGAGGATGCTGCAGCTGATTCTGCT
GTTAGAACTCCAACATTATTGTGTCAAAATTCATCAAATTCTCTTGATGCACTTATTTCT
CCAAGTACTGGAGCCAACCCTGGTTCATCGTTGTCTTTTATGAAAGGAGTTCTGCCAAAG
TACTTTAGCTCTGAATGGTCATTTGCTCAGTTTCACTTGCCAGAATGTACCCAGTACATT
GTTGCGTTTGGTTCTCAGAACACTGTTGTTACTGCTGGCACTGATGGAAGTTTCTATAGG
TGCTGCTTTGATCCTGTGAATGGAGGAGAAATGGTACAGCAGGAATATGTCCGCTTTCTG
AAAACAGAGAGTAGGCAGAGATAG

Peptide Sequence

PEP ID

XP_016484058.1
PEP Infomation

PREDICTED: autophagy-related protein 18d-like [Nicotiana tabacum]
Sequence

MRTMMVSKTKDPLESAHPKIEITRRTLLSSVVLSSPIFPFNHKSHITNHPPKHLGISLFD
RDIAVASTKFELHQLLPNQHKDFHSFCLHLVMTTLSSPTGSAVSPSRGTLSPAAYGTYES
PMPGASHSGHSEPEISDNDETELHSVSWNQDYSCFAAGTSRGFRVYNCDPFKETFRRDLK
SGGFGIVEMLFRCNILALVGARTNAQYPPNKVIIWDDHQSRCIGEFSFRSDVCAVKLRRD
CIVVVLEHKIYVYNFMDLKLLHQIETVGNPRGLCCLSHHLNTSVLACPGVRRGQVRVEHF
GLNMTKLIKAHDSQIACLTLTMDGLLLATASTRGTLIRLFNTMDGTQLQEVRRGVDKADI
YSIALSPNVQWLAVSSDKGTIHVYSLRVRVVGEDAAADSAVRTPTLLCQNSSNSLDALIS
PSTGANPGSSLSFMKGVLPKYFSSEWSFAQFHLPECTQYIVAFGSQNTVVTAGTDGSFYR
CCFDPVNGGEMVQQEYVRFLKTESRQR

Transcript Sequence

Gene sequence data has not been registered.